Canis Lupus Lupus Manifest
May 03, 2019

    canis_lupus_lupus_03May2019_5aYyB.fasta.gz
        FASTA file containing the final Hirise scaffolds.

    canis_lupus_lupus_03May2019_5aYyB.input_breaks.txt
        Tab-delimited table describing positions of breaks made in the input
        assembly scaffolds. Follows the same format as the table file
        described below.

    canis_lupus_lupus_03May2019_5aYyB.report.pdf
        Hirise scaffolding report, contains Dovetail library insert
        distribution(s), and contiguity plots and statistics for
        the input and output assemblies.
    
    canis_lupus_lupus_03May2019_5aYyB.table.txt
        Tab-delimited table describing positions of input assembly scaffolds
        in the Hirise scaffolds. The table has the following format:

            1. HiRise scaffold name
            2. Input sequence name
            3. Starting base (zero-based) of the input sequence
            4. Ending base of the input sequence
            5. Strand (- or +) of the input sequence in the scaffold
            6. Starting base (zero-based) in the HiRise scaffold
            7. Ending base in the HiRise scaffold

        where '-' in the strand column indicates that the sequence is reverse
        complemented relative to the input assembly.