[samfaipath] build FASTA index... [M::mm_idx_gen::0.122*1.01] collected minimizers [M::mm_idx_gen::0.139*1.83] sorted minimizers [M::main::0.139*1.83] loaded/built the index for 2 target sequence(s) [M::mm_mapopt_update::0.150*1.77] mid_occ = 12 [M::mm_idx_stat] kmer size: 15; skip: 10; is_hpc: 0; #seq: 2 [M::mm_idx_stat::0.157*1.74] distinct minimizers: 788430 (97.64% are singletons); average occurrences: 1.033; average spacing: 5.342; total length: 4349983 [M::worker_pipeline::51.941*7.63] mapped 48457 sequences [M::main] Version: 2.24-r1155-dirty [M::main] CMD: flye-minimap2 -x map-ont -t 8 -a -p 0.5 -N 10 --sam-hit-only -L -K 1G -z 1000 -Q --secondary-seq -I 64G /media/pabloati/HDD/pablo/macourse/results/bsubtilis/assembly/00-assembly/draft_assembly.fasta /media/pabloati/HDD/pablo/macourse/results/bsubtilis/filtered/bsubtilis_long_reads_filtered.fastq [M::main] Real time: 51.954 sec; CPU: 396.121 sec; Peak RSS: 1.018 GB [bam_sort_core] merging from 0 files and 4 in-memory blocks...